Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816470.1_cds_XP_016498817.1_12800
CDS Infomation

[gene=LOC107817490] [db_xref=GeneID:107817490] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016498817.1] [location=join(29389..30261,30827..31447)] [gbkey=CDS]
Sequence

ATGCAGATCTTCAACTTTTTCTCCCTTTTCCTTTTTGTGTCTTTCCTCTTTTTGTTAAGG
AAATGGAAGAACTCCAACAGCCAAATCAAAAGATTGCCTCCAGGCCCATGGAAACTACCT
TTAATTGGAAGCATGTTTCATATGCTAGGTGGACATCCACACCATGTCCTAACAAATTTA
GCCAAAAAATATGGACCTCTTATGCACCTTCAACTAGGGGAAATGCCTGTAGTTGTAGTT
ACTTCTCCAGAGATGGCAAAAGAAGTACTAAAAACTCATGACCTTGCTTTTGCATCTAGG
CCTAAATTTTTGGCCACCGAGATTGTCTTTTACAACTGTTCTGATATCGCCTTTTGCCCA
TATGGCGATTACTGGAGACAAATGCGTAAGATTTGTGTGATTGAATTGCTTACTGCCAAA
AATGTCCGATCATTTAGCGCGATTAGACAAGATGAAGTTCATCGTATGATTGAATTTTTT
CGATCATCTACTGATCAGCAAATTAATGTAACAAAGAGGATTTGTCAATTCACAAGCTCT
ATGACATGTAGATCAGCATTTGGGAAAGTAATTAAGGAGCAAGACGAATTTATACTACTA
GTCAAGAGAAATACAGCCTTAGTGGAAGGGTTTGATGTAGCTGATATATTCCCATCACTT
AAGTTTCTTCATGTGCTAAGCGGAAAGAAGGCTAGAGTTATGGATGTCCACCACAAGATA
GATGCCATTCTTGAAAATATCATCAATGAGCGCAAGGAAATTGCAACTGGTGAATTAGGA
GGTAAAGGTTTAATTGATGTACTATTAAGACTTATGAAAGAGGGAGGCCTTCAATTTCCA
ATCACCAACGACAACATTAAAGCCATTATTTTTGATATGTTTGCTGCGGGAACAGAAACT
TCATCGGTAGCAATTGATTGGGCCATGGTGGAAATGATGAAGAATCCAAATGTATTGGCC
AAAGCTCAAACAGAAGTAAGAAAAGCCTTTAGAGGGAAAGAAACTTTTGATGAAAATGAT
GTCGAGGAGTTGAAATACCTAAAGTTAGTCATTAAAGAAACTTTCAGACTACATCCTCCA
TTTCCTCTTTTGCTCCCAAGAGAATGTAGGGAAGAAACAGACATAAACGGGTACACTATT
CCTTTGAAAGCAAAAGTCATGGTTAATGTTTGGGCTATTGGTAGAGATCCAAAATATTGG
GATGATGCAGAAATCTTTAAACCTGAAAGATTTGAGCACAACTCTATGGATTTTGTTGGT
AATAATTTTGAATATCTTCCCTTTGGTAGTGGAAGAAGGAATTGCCCTGGGATATCATTT
GGTTTAGCTAACGTTTATTTTCCATTGGCTCAATTGTTGTACCACTTTAATTGGAAACTT
CCAACTGGAATCAATCCAAGTGAACTAGACTTGACTGAATCGGCTGGAGCATCTTGTGCT
AGAAAGAGCAACTTGTACTTGTTCCCTACTCCTTATCAACCTTGTCAAGAGTGA

Peptide Sequence

PEP ID

XP_016498817.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MQIFNFFSLFLFVSFLFLLRKWKNSNSQIKRLPPGPWKLPLIGSMFHMLGGHPHHVLTNL
AKKYGPLMHLQLGEMPVVVVTSPEMAKEVLKTHDLAFASRPKFLATEIVFYNCSDIAFCP
YGDYWRQMRKICVIELLTAKNVRSFSAIRQDEVHRMIEFFRSSTDQQINVTKRICQFTSS
MTCRSAFGKVIKEQDEFILLVKRNTALVEGFDVADIFPSLKFLHVLSGKKARVMDVHHKI
DAILENIINERKEIATGELGGKGLIDVLLRLMKEGGLQFPITNDNIKAIIFDMFAAGTET
SSVAIDWAMVEMMKNPNVLAKAQTEVRKAFRGKETFDENDVEELKYLKLVIKETFRLHPP
FPLLLPRECREETDINGYTIPLKAKVMVNVWAIGRDPKYWDDAEIFKPERFEHNSMDFVG
NNFEYLPFGSGRRNCPGISFGLANVYFPLAQLLYHFNWKLPTGINPSELDLTESAGASCA
RKSNLYLFPTPYQPCQE

Transcript Sequence

Gene sequence data has not been registered.